PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009767687.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 249aa    MW: 27446 Da    PI: 4.6899
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009767687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37.1e-173685255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+WvAeIr+p   + r +r +lg+f   ++Aa a++aa++kl+g
  XP_009767687.1 36 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFENSYDAAVAYDAAARKLYG 85
                    69****999.**********8...3.35*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.87E-183595No hitNo description
PROSITE profilePS5103221.4433693IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-293694IPR001471AP2/ERF domain
SMARTSM003804.4E-323699IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-203694IPR016177DNA-binding domain
PfamPF008472.5E-103685IPR001471AP2/ERF domain
PRINTSPR003673.4E-83748IPR001471AP2/ERF domain
PRINTSPR003673.4E-85975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MSSTYSVERK TKKITQATSR KGCMRGKGGP ENASCTYKGV RQRTWGKWVA EIREPNRGAR  60
LWLGTFENSY DAAVAYDAAA RKLYGADAKL NLPHLYNKQA QAQSQAQNSR PNTMGLDNAG  120
GPVSAPPTCN PAAVYNVASP STWSMGNDHT SFYFNNDFGN NSFSTADQTS FQFLDINQTA  180
EEFDENNINQ NEGIGGEMWR DLNMNLPEID DSSIWEEAKA STSFQEAVSD PGIYACNLDD  240
GINYPPWCG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-173793360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767687.10.0PREDICTED: dehydration-responsive element-binding protein 2D-like
TrEMBLK4BVH03e-98K4BVH0_SOLLC; Uncharacterized protein
STRINGSolyc04g080910.1.19e-98(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31552247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.16e-40ERF family protein